main (.csv)

Download original .csv file from GitHub

Module

Parameter

max_healthsystem_function

max_healthcare_seeking

Note [0 .0—> 0.0001 and 1.0 –> 0.9999 so that floating point value is preserved]

0

Alri

sensitivity_of_classification_of_fast_breathing_pneumonia_facility_level0

0.9999

1

Alri

sensitivity_of_classification_of_danger_signs_pneumonia_facility_level0

0.9999

2

Alri

sensitivity_of_classification_of_non_severe_pneumonia_facility_level1

0.9999

3

Alri

sensitivity_of_classification_of_severe_pneumonia_facility_level1

0.9999

4

Alri

sensitivity_of_classification_of_non_severe_pneumonia_facility_level2

0.9999

5

Alri

sensitivity_of_classification_of_severe_pneumonia_facility_level2

0.9999

6

Alri

prob_iCCM_severe_pneumonia_treated_as_fast_breathing_pneumonia

0.7

Remain, as sensitivity_of_classification_of_danger_signs_pneumonia_facility_level0 = 1.0, this parameter does not matter

7

Alri

prob_IMCI_severe_pneumonia_treated_as_non_severe_pneumonia

0.7

Remain, as sensitivity_of_classification_of_severe_pneumonia_facility_level1 = 1.0, this parameter does not matter

8

Alri

prob_for_followup_if_treatment_failure

0.9999

9

CardioMetabolicDisorders

ever_stroke_hsi

#ever_stroke!A1

ever_stroke_hsi/sensitivity_of_assessment, ever_stroke_hsi/pr_assessed_other_symptoms

10

CardioMetabolicDisorders

ever_heart_attack_hsi

#ever_heart_attack!A1

ever_heart_attack_hsi/sensitivity_of_assessment, ever_heart_attack_hsi/pr_assessed_other_symptoms

11

CardioMetabolicDisorders

diabetes_hsi

#diabetes!A1

diabetes_hsi/sensitivity_of_assessment, diabetes_hsi/pr_assessed_other_symptoms

12

CardioMetabolicDisorders

diabetes_hsi

#diabetes!A1

diabetes_hsi/pr_seeking_further_appt_if_drug_not_available

13

CardioMetabolicDisorders

hypertension_hsi

#hypertension!A1

hypertension_hsi/sensitivity_of_assessment, hypertension_hsi/pr_assessed_other_symptoms

14

CardioMetabolicDisorders

hypertension_hsi

#hypertension!A1

hypertension_hsi/pr_seeking_further_appt_if_drug_not_available

15

CardioMetabolicDisorders

chronic_lower_back_pain_hsi

#chronic_lower_back_pain!A1

chronic_lower_back_pain_hsi/sensitivity_of_assessment, chronic_lower_back_pain_hsi/pr_assessed_other_symptoms

16

CardioMetabolicDisorders

chronic_lower_back_pain_hsi

#chronic_lower_back_pain!A1

chronic_lower_back_pain_hsi/pr_seeking_further_appt_if_drug_not_available

17

CardioMetabolicDisorders

chronic_kidney_disease_hsi

#chronic_kidney_disease!A1

chronic_kidney_disease_hsi/pr_assessed_other_symptoms

18

CardioMetabolicDisorders

chronic_kidney_disease_hsi

#chronic_kidney_disease!A1

chronic_kidney_disease_hsi/pr_seeking_further_appt_if_drug_not_available

19

CardioMetabolicDisorders

chronic_ischemic_hd_hsi

#chronic_ischemic_hd!A1

chronic_ischemic_hd_hsi/sensitivity_of_assessment, chronic_ischemic_hd_hsi/pr_assessed_other_symptoms

20

CardioMetabolicDisorders

chronic_ischemic_hd_hsi

#chronic_ischemic_hd!A1

chronic_ischemic_hd_hsi/pr_seeking_further_appt_if_drug_not_available

21

CardioMetabolicDisorders

hypertension_testing

#hypertension_testing!A1

#hypertension_testing!A1

hypertension_testing/baseline_annual_probability

22

CardioMetabolicDisorders

prob_care_provided_given_seek_emergency_care

0.9999

23

CareOfWomenDuringPregnancy

prob_seek_anc2

[1.0, 1.0]

24

CareOfWomenDuringPregnancy

prob_seek_anc3

[1.0, 1.0]

25

CareOfWomenDuringPregnancy

prob_seek_anc5

[1.0, 1.0]

26

CareOfWomenDuringPregnancy

prob_seek_anc6

[1.0, 1.0]

27

CareOfWomenDuringPregnancy

prob_seek_anc7

[1.0, 1.0]

28

CareOfWomenDuringPregnancy

prob_seek_anc8

[1.0, 1.0]

29

CareOfWomenDuringPregnancy

prob_intervention_delivered_urine_ds

[1.0, 1.0]

30

CareOfWomenDuringPregnancy

prob_intervention_delivered_bp

[1.0, 1.0]

31

CareOfWomenDuringPregnancy

prob_adherent_ifa

[1.0, 1.0]

32

CareOfWomenDuringPregnancy

prob_intervention_delivered_syph_test

[1.0, 1.0]

33

CareOfWomenDuringPregnancy

prob_intervention_delivered_gdm_test

[1.0, 1.0]

34

Contraception

max_number_of_runs_of_hsi_if_consumable_not_available

1000

Remain, this value is already big enough

35

Depression

prob_3m_stop_antidepr

0.7

Remain, not sure what is the ideal value

36

Depression

prob_3m_default_antidepr

0.0001

37

Depression

pr_assessed_for_depression_in_generic_appt_level1

0.9999

38

Depression

pr_assessed_for_depression_for_perinatal_female

0.9999

39

Depression

sensitivity_of_assessment_of_depression

0.9999

40

Diarrhoea

prob_hospitalization_on_danger_signs

0.9999

41

Diarrhoea

sensitivity_severe_dehydration_visual_inspection

0.9999

42

Diarrhoea

specificity_severe_dehydration_visual_inspection

0.9999

43

Epilepsy

base_prob_3m_stop_antiepileptic

0.0001

44

Epilepsy

prob_start_anti_epilep_when_seizures_detected_in_generic_first_appt

0.9999

45

HealthSeekingBehaviour

force_any_symptom_to_lead_to_healthcareseeking

True

46

Hiv

hiv_testing_rates

#MoH_numbers_tests!A1

#MoH_numbers_tests!A1

100% for 2010 onwards

47

Hiv

prob_start_art_or_vs

#spectrum_treatment_cascade!A1

100% for 2010 onwards

48

Hiv

hiv_testing_rate_adjustment

0.9999

0.9999

Make sure hiv_testing_rates is not changed in the ideal case

49

Hiv

treatment_initiation_adjustment

0.9999

Make sure prob_start_or_vs is not changed in the ideal case

50

Hiv

vs_adjustment

0.9999

Make sure prob_start_or_vs is not changed in the ideal case

51

Hiv

prob_hiv_test_at_anc_or_delivery

0.9999

52

Hiv

prob_hiv_test_for_newborn_infant

0.9999

53

Hiv

prob_behav_chg_after_hiv_test

0.9999

54

Hiv

prob_prep_for_fsw_after_hiv_test

0.9999

0.9999

55

Hiv

prob_prep_for_agyw

0.9999

0.9999

56

Hiv

prob_circ_after_hiv_test

0.9999

0.9999

57

Hiv

probability_of_being_retained_on_prep_every_3_months

0.9999

58

Hiv

probability_of_being_retained_on_art_every_3_months

0.9999

59

Hiv

probability_of_seeking_further_art_appointment_if_drug_not_available

0.9999

60

Hiv

probability_of_seeking_further_art_appointment_if_appointment_not_available

0.9999

61

Labour

odds_deliver_at_home

[0.0,0.0]

Make the prob of delivery at home as 0.0

62

Labour

prob_intervention_delivered_anaemia_assessment_pnc

[1.0,1.0]

63

Labour

prob_timings_pnc

[[1.0,0.0], [1.0,0.0]]

64

Labour

odds_will_attend_pnc

[10000.0,10000.0]

Particularly note that the prob can never reach 1.0 by simply increaseing odds; ideally, we should make the prob param exlicit in the coding

65

Labour

or_pnc_age_30_35

[1.75, 1.75]

Remain

66

Labour

or_pnc_age_>35

[1.86, 1.86]

Remain

67

Labour

or_pnc_rural

[0.55, 0.55]

Remain

68

Labour

or_pnc_wealth_level_1

[0.72, 0.72]

Remain

69

Labour

or_pnc_anc4+

[1.2 , 1.2]

Remain

70

Labour

or_pnc_caesarean_delivery

[1.93, 1.93]

Remain

71

Labour

or_pnc_facility_delivery

[1.91, 1.91]

Remain

72

Labour

or_pnc_parity_>4

[0.03, 0.03]

Remain

73

Labour

prob_careseeking_for_complication

[1.0,1.0]

74

Labour

prob_careseeking_for_complication_pn

[1.0,1.0]

75

Labour

prob_adherent_ifa

[1.0,1.0]

76

Labour

prob_hcw_avail_iv_abx

[1.0, 1.0]

77

Labour

prob_hcw_avail_uterotonic

[1.0, 1.0]

78

Labour

prob_hcw_avail_anticonvulsant

[1.0, 1.0]

79

Labour

prob_hcw_avail_man_r_placenta

[1.0, 1.0]

80

Labour

prob_hcw_avail_avd

[1.0, 1.0]

81

Labour

prob_hcw_avail_blood_tran

[1.0, 1.0]

82

Labour

prob_hcw_avail_surg

[1.0, 1.0]

83

Labour

prob_hcw_avail_neo_resus

[1.0, 1.0]

84

Labour

prob_hcw_avail_retained_prod

[1.0, 1.0]

85

Labour

mean_hcw_competence_hc

[[1.0, 1.0], [1.0, 1.0]]

86

Labour

mean_hcw_competence_hp

[[1.0, 1.0], [1.0, 1.0]]

87

Malaria

prob_malaria_case_tests

0.9999

Default value 0.4

88

Malaria

rdt_testing_rates

#WHO_TestData2023!A1

#WHO_TestData2023!A1

Rate_rdt_testing, default values from 2010-2023 < 0.65

89

Malaria

scaling_factor_for_rdt_availability

0.9999

0.9999

This is to make sure that the rdt_testing_rates of 0.9999 remain/not to be scaled up, although its defualt value is 1.2.

90

NewbornOutcomes

prob_care_seeking_for_complication

[1.0, 1.0]

91

NewbornOutcomes

prob_pnc_check_newborn

[1.0,1.0]

92

NewbornOutcomes

prob_timings_pnc_newborns

[[1.0,0.0],[1.0,0.0]]

93

PostnatalSupervisor

prob_care_seeking_postnatal_emergency

[1.0,1.0]

94

PostnatalSupervisor

prob_care_seeking_postnatal_emergency_neonate

[1.0,1.0]

95

PostnatalSupervisor

odds_care_seeking_fistula_repair

[10000.0,10000.0]

Particularly note that the prob can never reach 1.0 by simply increaseing odds; ideally, we should make the prob param exlicit in the coding

96

PostnatalSupervisor

aor_cs_fistula_age_15_19

[0.31, 0.31]

Remain

97

PostnatalSupervisor

aor_cs_fistula_age_lowest_education

[0.69, 0.69]

Remain

98

PregnancySupervisor

prob_care_seeking_ectopic_pre_rupture

[1.0,1.0]

99

PregnancySupervisor

prob_seek_care_pregnancy_complication

[1.0,1.0]

100

PregnancySupervisor

prob_seek_care_pregnancy_loss

[1.0,1.0]

101

PregnancySupervisor

prob_seek_care_induction

[1.0,1.0]

102

PregnancySupervisor

prob_anc1_months_2_to_4

[[1.0, 0.0, 0.0], [1.0, 0.0, 0.0]]

103

PregnancySupervisor

prob_anc1_months_5_to_9

[[0.345, 0.245, 0.28, 0.015, 0.015, 0.1], [0.41, 0.25, 0.21, 0.015, 0.015, 0.1]]

Remain

104

PregnancySupervisor

odds_early_init_anc4

[10000.0,10000.0]

Particularly note that the prob can never reach 1.0 by simply increaseing odds; ideally, we should make the prob param exlicit in the coding

105

PregnancySupervisor

aor_early_anc4_20_24

[1.26, 1.26]

Remain

106

PregnancySupervisor

aor_early_anc4_25_29

[1.42, 1.42]

Remain

107

PregnancySupervisor

aor_early_anc4_30_34

[1.48, 1.48]

Remain

108

PregnancySupervisor

aor_early_anc4_35_39

[1.61, 1.61]

Remain

109

PregnancySupervisor

aor_early_anc4_40_44

[1.47, 1.47]

Remain

110

PregnancySupervisor

aor_early_anc4_45_49

[1.77, 1.77]

Remain

111

PregnancySupervisor

aor_early_anc4_2010

[1.21, 1.21]

Remain

112

PregnancySupervisor

aor_early_anc4_2015

[2.12,2.12]

Remain

113

PregnancySupervisor

aor_early_anc4_parity_2_3

[0.7, 0.7]

Remain

114

PregnancySupervisor

aor_early_anc4_parity_4_5

[0.62, 0.62]

Remain

115

PregnancySupervisor

aor_early_anc4_parity_6+

[0.59, 0.59]

Remain

116

PregnancySupervisor

aor_early_anc4_secondary_edu

[1.24, 1.24]

Remain

117

PregnancySupervisor

aor_early_anc4_tertiary_edu

[2.35, 2.35]

Remain

118

PregnancySupervisor

aor_early_anc4_richest_wealth

[1.23, 1.23]

Remain

119

PregnancySupervisor

prob_late_initiation_anc4

[0.3, 0.29]

Remain

120

PregnancySupervisor

prob_early_initiation_anc_below4

[0.115, 0.101]

Remain

121

PregnancySupervisor

prob_early_anc_at_facility_level_1_2

[[0.5, 0.5], [0.5, 0.5]]

Remain

122

Schisto

delay_till_hsi_a_repeated

1.0000001

123

Schisto

delay_till_hsi_b_repeated

1.0000001

124

Schisto

prob_sent_to_lab_test_children

0.9999

125

Schisto

prob_sent_to_lab_test_adults

0.9999

126

Schisto

MDA_coverage_historical

#MDA_historical_Coverage!A1

100% for 2010 onwards, incl. PSAC, SAC, Adults

127

Schisto

MDA_coverage_prognosed

#MDA_prognosed_Coverage!A1

100% for 2010 onwards, the Frequency set to 12 for each district

128

Stunting

prob_stunting_diagnosed_at_generic_appt

0.9999

129

Tb

ipt_coverage

#ipt_coverage!A1

100% for 2010 onwards

130

Tb

rate_testing_active_tb

#NTP2019!A1

100% for 2010 onwards

131

Tb

sens_clinical

0.9999

132

Tb

spec_clinical

0.9999

133

Tb

prob_retained_ipt_6_months

0.9999