parameters (.csv)

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	parameter_name	value	param_label	prior_min	prior_max	prior_note	reference	Unnamed: 7
0	scaling_factor_WHO	1.60303	local	0.5	5	vague prior
1	prop_mdr2010	0.0186	local	0.001	0.1	vague prior
2	monthly_prob_relapse_tx_complete	0.0027	local	0.001	0.1	vague prior
3	monthly_prob_relapse_tx_incomplete	0.0116	local	0.001	0.1	vague prior
4	monthly_prob_relapse_2yrs	0.0001	local	0.001	0.1	vague prior
5	rr_relapse_hiv	4.7	universal	2.5	8.9	95% CI
6	rr_relapse_diabetes	1.86	universal	0.01	100	vague prior	Huangfu et al 2019
7	duration_active_disease_years	3	universal	1	10	vague prior
8	prop_smear_positive	0.62	local	0.1	1	vague prior
9	prop_smear_positive_hiv	0.35	local	0.1	1	vague prior
10	death_rate_child0_4_treated	0.05	universal	0	1	vague prior
11	death_rate_child5_14_treated	0.06	universal	0	1	vague prior
12	death_rate_adult_treated	0.107	undetermined	0	1	calibration	changed from 0.086
13	death_rate_smear_pos_untreated	0.7	universal	0	1	vague prior
14	death_rate_smear_neg_untreated	0.2	universal	0	1	vague prior
15	rr_death_diabetes	1.51	universal	0.01	100	vague prior	Huangfu et al 2019
16	rr_tb_child	0.1	universal	0.01	100	vague prior	assumed
17	rr_tb_bcg	0.42	universal	0.01	100	vague prior
18	rr_tb_hiv	5	universal	0.01	100	vague prior	20.6getahun2010	assumed
19	rr_tb_aids	26	universal	0.01	100	vague prior	26williams_pnas	assumed
20	rr_tb_art_adult	0.35	universal	0.28	0.44	CI
21	rr_tb_art_child	0.3	universal	0.21	0.39	CI
22	rr_tb_obese	0.4	universal	0.01	100	vague prior
23	rr_tb_diabetes	3	universal	0.01	100	vague prior
24	rr_tb_alcohol	2.9	universal	0.01	100	vague prior
25	rr_tb_smoking	1.3	universal	0.01	100	vague prior
26	rr_ipt_adult	0.4	universal	0.01	100	vague prior
27	rr_ipt_child	0.55	universal	0.4	0.75	CI
28	rr_ipt_adult_hiv	0.68	universal	0.54	0.85	CI
29	rr_ipt_child_hiv	0.31	universal	0.11	0.87	CI
30	rr_ipt_art_child	0.76	universal	0.01	100	vague prior
31	rr_ipt_art_adult	0.63	universal	0.01	100	vague prior
32	sens_xpert_smear_negative	0.68	universal	0	1	vague prior
33	sens_xpert_smear_positive	0.98	universal	0	1	vague prior
34	spec_xpert_smear_negative	0.99	universal	0	1	vague prior
35	spec_xpert_smear_positive	0.99	universal	0	1	vague prior
36	sens_sputum_smear_positive	1	universal	0	1	vague prior
37	spec_sputum_smear_positive	1	universal	0	1	vague prior
38	sens_clinical	0.209	universal	0.12	0.33	vague prior
39	spec_clinical	0.953	universal	0.92	0.97	vague prior
40	sens_xray_smear_negative	0.8	universal	0	1	vague prior
41	sens_xray_smear_positive	0.91	universal	0	1	vague prior
42	spec_xray_smear_negative	0.67	universal	0	1	vague prior
43	spec_xray_smear_positive	0.67	universal	0	1	vague prior
44	prob_tx_success_ds	0.837	local	0	1	vague prior
45	prob_tx_success_mdr	0.597	local	0	1	vague prior
46	prob_tx_success_0_4	0.94	local	0	1	vague prior
47	prob_tx_success_5_14	0.92	local	0	1	vague prior
48	rate_testing_general_pop	0.025	local	0	1	vague prior
49	ds_treatment_length	6	local	1	24	vague prior
50	ds_retreatment_length	8	local	1	24	vague prior
51	mdr_treatment_length	24	local	1	48	vague prior
52	prob_retained_ipt_6_months	0.9	local	0	1	vague prior
53	age_eligibility_for_ipt	5	local	0	20	vague prior
54	ipt_start_date	2014	local	2010	2030	vague prior
55	first_line_test	sputum	local			vague prior
56	second_line_test	xpert	local			vague prior
57	tb_healthseekingbehaviour_cap	5	local	1	20	vague prior
58	data_end	2022	local	2020	2030	vague prior
59	length_of_inpatient_stay_if_terminal	[5,10]	local	[0,1]	[1,30]	vague prior
60	type_of_scaleup	none	scenario
61	scaleup_start_year	2025	scenario	2020	2040	vague prior
62	age_threshold_adult_years	15	local	10	20	vague prior
63	age_threshold_ipt_dispensation	2	local	0	10	vague prior
64	age_threshold_infant_years	5	local	3	10	vague prior
65	odds_ratio_health_seeking_adults_fatigue	5	local	0.01	100	vague prior
66	odds_ratio_health_seeking_children_fatigue	5	local	0.01	100	vague prior
67	odds_ratio_health_seeking_adults_night_sweats	5	local	0.01	100	vague prior
68	odds_ratio_health_seeking_children_night_sweats	5	local	0.01	100	vague prior
69	sensitivity_sputum_test_smear_negative	0	universal	0	1	vague prior
70	specificity_sputum_test_smear_negative	1	universal	0	1	vague prior
71	sensitivity_culture_test	1	universal	0	1	vague prior
72	specificity_culture_test	1	universal	0	1	vague prior
73	screening_scheduling_window_months	1	local	1	12	vague prior
74	ipt_scheduling_window_child_of_tb_mother_days	28	local	1	365	vague prior
75	hv_min_days_between_tests	7	local	1	365	vague prior
76	tb_min_days_between_tests	7	local	1	365	vague prior
77	xray_scheduling_weeks_level2	1	local	1	52	vague prior
78	TbActiveCasePoll_frequency_years	1	undetermined	1	5	design decision
79	TbActiveEvent_frequency_days	1	undetermined	1	5	design decision
80	TbRegularEvents_frequency_months	1	undetermined	1	12	design decision
81	relapse_early_late_cutoff_years	2	local	1	5	vague prior
82	ipt_reevaluate_continuation_frequency_months	6	local	1	24	vague prior
83	active_disease_duration_months	36	universal	1	120	vague prior
84	follow_up_interval_months	1	local	1	24	vague prior
85	treatment_retry_weeks	1	local	1	12	vague prior
86	death_timing_hiv_positive_min_months	1	universal	1	12	vague prior
87	death_timing_hiv_positive_max_months	5	universal	1	12	vague prior
88	death_timing_hiv_negative_min_months	1	universal	1	12	vague prior
89	death_timing_hiv_negative_max_months	6	universal	1	12	vague prior
90	prob_treatment_availability	0.6	local	0	1	vague prior
91	TbSelfCureEvent_frequency_months	12	undetermined	6	18	design decision
92	number_high_risk_contacts	5	local	1	15	vague prior
93	ipt_scheduling_delay_days_min	1	local	1	15	vague prior
94	ipt_scheduling_delay_days_max	14	local	10	20	vague prior
95	xpert_appointment_delay_days	1	local	1	15	vague prior
96	mdr_level2_appt_delay_days	1	local	1	15	vague prior
97	screening_appointment_window_days	14	local	1	30	vague prior
98	ipt_appointment_window_days	14	local	1	30	vague prior
99	max_duration_ipt_continued_treatment_months	36	local	1	15	vague prior
100	min_days_symptomatic_required_for_screening	14	local	1	30	vague prior
101	number_doses_3hp_per_dispensation	12	local	1	24	vague prior
102	number_doses_ipt_per_dispensation	182	local	1	365	vague prior