parameters (.csv)

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	parameter_name	value	lower	upper	notes
0	scaling_factor_WHO	1.60303
1	prop_mdr2010	0.0186
2	monthly_prob_relapse_tx_complete	0.0027	0.0014	0.00405
3	monthly_prob_relapse_tx_incomplete	0.0116	0.0058	0.0174
4	monthly_prob_relapse_2yrs	0.0001	5e-05	0.0015
5	rr_relapse_hiv	4.7
6	rr_relapse_diabetes	1.86			Huangfu et al 2019
7	duration_active_disease_years	3
8	prop_smear_positive	0.62	0.42	0.8
9	prop_smear_positive_hiv	0.35	0.19	0.54
10	death_rate_child0_4_treated	0.05
11	death_rate_child5_14_treated	0.06
12	death_rate_adult_treated	0.107	changed from 0.086
13	death_rate_smear_pos_untreated	0.7
14	death_rate_smear_neg_untreated	0.2
15	rr_death_diabetes	1.51			Huangfu et al 2019
16	rr_tb_child	0.1	assumed
17	rr_tb_bcg	0.42
18	rr_tb_hiv	5	assumed		20.6getahun2010
19	rr_tb_aids	26	assumed		26williams_pnas
20	rr_tb_art_adult	0.35
21	rr_tb_art_child	0.3
22	rr_tb_obese	0.4
23	rr_tb_diabetes	3
24	rr_tb_alcohol	2.9
25	rr_tb_smoking	1.3
26	rr_ipt_adult	0.4
27	rr_ipt_child	0.55
28	rr_ipt_adult_hiv	0.68
29	rr_ipt_child_hiv	0.31
30	rr_ipt_art_child	0.76
31	rr_ipt_art_adult	0.63
32	sens_xpert_smear_negative	0.68
33	sens_xpert_smear_positive	0.98
34	spec_xpert_smear_negative	0.99
35	spec_xpert_smear_positive	0.99
36	sens_sputum_smear_positive	1
37	spec_sputum_smear_positive	1
38	sens_clinical	0.209	0.12	0.33
39	spec_clinical	0.953	0.92	0.97
40	sens_xray_smear_negative	0.8
41	sens_xray_smear_positive	0.91
42	spec_xray_smear_negative	0.67
43	spec_xray_smear_positive	0.67
44	prob_tx_success_ds	0.837
45	prob_tx_success_mdr	0.597
46	prob_tx_success_0_4	0.94
47	prob_tx_success_5_14	0.92
48	rate_testing_general_pop	0.025
49	ds_treatment_length	6
50	ds_retreatment_length	8
51	mdr_treatment_length	24
52	prob_retained_ipt_6_months	0.9
53	age_eligibility_for_ipt	5
54	ipt_start_date	2014
55	first_line_test	sputum
56	second_line_test	xpert
57	tb_healthseekingbehaviour_cap	5
58	data_end	2022
59	length_of_inpatient_stay_if_terminal	[5,10]
60	type_of_scaleup	none
61	scaleup_start_year	2025