parameter values (.csv)

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	parameter_name	value	param_label	prior_min	prior_max	prior_note	reference
0	delay_till_hsi_a_repeated	5.00001	local	1	24	vague prior	assumption
1	delay_till_hsi_b_repeated	20.0001	local	1	24	vague prior	assumption
2	rr_WASH	0.6	local	0.01	100	vague prior	Grimes 2014
3	calibration_scenario	0	scenario	NA	NA	scenario
4	urine_filtration_sensitivity_lowWB	0.6	universal	0	1	vague prior
5	urine_filtration_sensitivity_moderateWB	0.68	universal	0	1	vague prior
6	urine_filtration_sensitivity_heavyWB	0.75	universal	0	1	vague prior
7	urine_filtration_specificity_lowWB	0.999999	universal	0	1	vague prior
8	urine_filtration_specificity_moderateWB	0.999999	universal	0	1	vague prior
9	urine_filtration_specificity_heavyWB	0.999999	universal	0	1	vague prior
10	kato_katz_sensitivity_moderateWB	0.5	universal	0	1	vague prior
11	kato_katz_sensitivity_heavyWB	0.62	universal	0	1	vague prior
12	kato_katz_specificity_moderateWB	0.999999	universal	0	1	vague prior
13	kato_katz_specificity_heavyWB	0.999999	universal	0	1	vague prior
14	scaleup_WASH	continue	scenario	NA	NA	scenario
15	scaleup_WASH_start_year	2024	scenario	2020	2050	scenario
16	mda_coverage	0.7	scenario	0	1	scenario
17	mda_target_group	SAC	scenario			scenario
18	mda_frequency_months	12	scenario	1	12	scenario
19	scaling_factor_baseline_risk	0.01	undetermined	0	1	calibration
20	baseline_risk	5	undetermined	0	100	calibration
21	background_gamma	1.3	undetermined	0	5	calibration
22	background_rel	0.02	undetermined	0	1	calibration
23	daly_weight_mild_schistosomiasis	0	universal	0	1	vague prior
24	daly_weight_moderate_s_mansoni	0.011	universal	0	1	vague prior
25	daly_weight_heavy_s_mansoni	0.325	universal	0	1	vague prior
26	daly_weight_moderate_s_haematobium	0.011	universal	0	1	vague prior
27	daly_weight_heavy_s_haematobium	0.325	universal	0	1	vague prior
28	R0_haematobium	1.6	local	0	5	vague prior
29	heavy_intensity_threshold_haematobium	20	universal	0	100	vague prior	WHO
30	heavy_intensity_threshold_PSAC_haematobium	5	universal	0	100	vague prior	assumption
31	low_intensity_threshold_haematobium	10	universal	0	100	vague prior	assumption
32	worms_fecundity_haematobium	0.005	universal	0	1	vague prior	Truscott et al
33	worm_lifespan_haematobium	6	universal	0	20	vague prior	Anderson et al 2016
34	beta_PSAC_haematobium	0.3	universal	0	5	vague prior	Truscott et al
35	beta_SAC_haematobium	1.0000001	universal	0	5	vague prior	Truscott et al
36	beta_Adults_haematobium	0.06	universal	0	5	vague prior	Toor 2018
37	PZQ_efficacy_haematobium	0.941	universal	0	1	vague prior	Zwang 2014
38	baseline_prevalence_haematobium	0.116	local	0	1	vague prior	average from LatestData 2010
39	R0_mansoni	1.66	undetermined	0	5	calibration
40	heavy_intensity_threshold_mansoni	28	universal	0	100	vague prior	WHO
41	heavy_intensity_threshold_PSAC_mansoni	20	universal	0	100	vague prior	assumption
42	low_intensity_threshold_mansoni	7	universal	0	100	vague prior	assumption
43	worms_fecundity_mansoni	0.0006	universal	0	1	vague prior	Chan et al
44	worm_lifespan_mansoni	4	universal	0	20	vague prior	Anderson et al 2017
45	beta_PSAC_mansoni	0.3	universal	0	5	vague prior	Truscott et al
46	beta_SAC_mansoni	1.000001	universal	0	5	vague prior	Truscott et al
47	beta_Adults_mansoni	0.06	universal	0	5	vague prior	Toor 2018
48	PZQ_efficacy_mansoni	0.863	universal	0	1	vague prior	Zwang 2014
49	baseline_prevalence_mansoni	0.031	local	0	1	vague prior	average from LatestData 2010
50	odds_ratio_health_seeking_children_schisto_low	0.01	local	0.01	100	vague prior
51	odds_ratio_health_seeking_adults_schisto_low	0.01	local	0.01	100	vague prior
52	kato_katz_sensitivity_lowWB	0.0000001	universal	0	1	vague prior
53	kato_katz_specificity_lowWB	0.0000001	universal	0	1	vague prior
54	urine_filtration_sensitivity_noneWB	0.0000001	universal	0	1	vague prior
55	urine_filtration_specificity_noneWB	0.0000001	universal	0	1	vague prior
56	single_district_calibration_number	19	scenario	NA	NA	scenario
57	single_district_calibration_name	Zomba	scenario	NA	NA	scenario
58	single_district_calibration_region	Southern	scenario	NA	NA	scenario
59	mda_schedule_month	7	undetermined	1	12	design decision
60	mda_schedule_day	1	undetermined	1	31	design decision
61	minimum_baseline_prevalence	0.000001	undetermined	1.00E-10	1.00E-03	design decision
62	prevalence_lower_bound	0.000000001	undetermined	0	1	design decision
63	prevalence_upper_bound	0.9999999	undetermined	0	1	design decision
64	infant_min_age	0	undetermined	0	5	structural
65	infant_max_age	1	undetermined	0	5	structural
66	psac_min_age	2	undetermined	0	10	structural
67	psac_max_age	4	undetermined	0	10	structural
68	sac_min_age	5	undetermined	0	20	structural
69	sac_max_age	14	undetermined	0	20	structural
70	adults_min_age	15	undetermined	10	25	structural
71	adults_max_age	120	undetermined	80	150	structural
72	mda_execute	TRUE	scenario	NA	NA	scenario
73	single_district	FALSE	scenario	NA	NA	scenario
74	main_polling_frequency	1	undetermined	1	12	design decision
75	worm_maturation_period_months	1	universal	1	12	vague prior
76	worm_death_check_frequency_years	1	local	1	5	vague prior
77	mda_appointment_window_months	1	local	1	12	vague prior
78	wash_scaleup_frequency_years	1	local	1	5	vague prior
79	recent_sanitation_window_years	1	local	1	5	vague prior
80	avg_weight_psac_kg	17.5	universal	10	25	vague prior	Child 0-5, maximum weight 17.5kg (WHO- average between girls/boys)
81	avg_weight_sac_kg	30	universal	20	50	vague prior	Child aged 5-15, use mid-point age 10: 50th percentile weight=30kg
82	avg_weight_adult_kg	62	universal	50	80	vague prior	Adult, average weight 62kg