InitialData haematobium (.csv)

Download original .csv file from GitHub

District

Region

R0

gamma_alpha

prop_susceptible

Mean_worm_burden

mean_prevalence

min_prevalence

max_prevalence

classification

notes

equilibrium

0

Balaka

Southern

1.6

0.24

0.263074274

0.243196363

16.23168271153846

0

33.333332

moderate

61.7

1

Blantyre

Southern

1.6

0.24

0.287869219

0.64576811

17.76153078478261

0

59.375

moderate

2

Blantyre City

Southern

1.6

0.24

0.287869219

0.162304999

17.76153078478261

0

59.375

moderate

same as Blantyre

3

Chikwawa

Southern

1.6

0.24

0.163420453

0.372114422

10.083041966666666

5.7142859

14.190012

moderate

4

Chiradzulu

Southern

1.6

0.24

0.539629302

1.152520705

33.29512790909091

10

80

moderate

5

Chitipa

Northern

1.6

0.24

0.476689854

0.445357549

29.411764

29.411764

29.411764

moderate

6

Dedza

Central

1.6

0.24

0

0.293609335

0

0

0

zero

7

Dowa

Central

1.6

0.24

0.074517034

0

4.597701

0

13.793103

low

8

Karonga

Northern

1.6

0.24

0

0.258116143

0

0

0

zero

no data

9

Kasungu

Central

1.6

0.24

0

0.363186976

0

0

0

zero

no data

10

Likoma

Northern

1.6

0.24

0.463694846

0.731112179

28.609972

27.138643

30.081301

moderate

11

Lilongwe

Central

1.6

0.24

0.181845957

0.520488402

11.219895524657534

0

53.333332

moderate

12

Lilongwe City

Central

1.6

0.24

0.181845957

0.223915877

11.219895524657534

0

53.333332

moderate

same as Lilongwe

13

Machinga

Southern

1.6

0.24

0.032414911

0.307289525

2

2

2

low

14

Mangochi

Southern

1.6

0.24

0.335157815

0.258322282

20.67923721111111

0

75.862068

moderate

15

Mchinji

Central

1.6

0.24

0.031779324

0.337462336

1.9607843

1.9607843

1.9607843

low

16

Mulanje

Southern

1.6

0.24

0.189086985

1.300971773

11.666667

11.666667

11.666667

moderate

17

Mwanza

Southern

1.6

0.24

0.303963878

0.394527999

18.75457126

0

73.333336

moderate

18

Mzimba

Northern

1.6

0.24

0.134059643

0.159890096

8.27148

0

56.666

moderate

mean of Mzimba North and Mzimba South

19

Mzuzu City

Northern

1.6

0.24

0

0.076377257

0

0

0

zero

no data

20

Neno

Southern

1.6

0.24

0.267623752

0.235995197

16.512385492307693

0

46.666668

moderate

21

Nkhata Bay

Northern

1.6

0.24

0.050423194

0.039311684

3.11111106

0

26.666666

low

22

Nkhotakota

Central

1.6

0.24

0.272931118

0.808087305

16.83985

0

43.33

moderate

mean of Nkhota kota and Nkhotakota

23

Nsanje

Southern

1.6

0.24

0.189086985

0.909307881

11.666667

11.666667

11.666667

moderate

24

Ntcheu

Central

1.6

0.24

0.223400142

0.28437904

13.783788737857142

0

94.871796

moderate

25

Ntchisi

Central

1.6

0.24

0.278038314

0.315706619

17.154963952173915

0

72.727272

moderate

26

Phalombe

Southern

1.6

0.24

0.372771475

3.141129345

23

46.666668

46.666668

moderate

edited mean as later surveys show much lower prevalence

27

Rumphi

Northern

1.6

0.24

0

0

0

0

0

zero

28

Salima

Central

1.6

0.24

0.097188236

0.114684668

5.996514144

0

18.181818

low

29

Thyolo

Southern

1.6

0.24

0

0.285935085

0

0

0

zero

30

Zomba

Southern

1.6

0.24

0.164159254

0.245633127

10.128625957142857

3.3333333

16.666666

moderate

31

Zomba City

Southern

1.6

0.24

0.164159254

0.245633127

10.128625957142857

3.3333333

16.666666

moderate

same as Zomba

32

33

34

35