PostnatalSupervisor (.xlsx)

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parameter_values

	parameter_name	value	Unnamed: 2
0	prob_obstetric_fistula	[0.00426, 0.00426]
1	rr_obstetric_fistula_obstructed_labour	[14.8, 14.8]	https://pubmed.ncbi.nlm.nih.gov/28550462/
2	prevalence_type_of_fistula	[[0.924, 0.076] , [0.924, 0.076]]	https://pubmed.ncbi.nlm.nih.gov/17869256/#:~:text=This%20study%20from%20Southern%20Malawi,were%20not%20of%20obstetric%20origin.
3
4	prob_secondary_pph	[0.0002, 0.00034]
5	rr_secondary_pph_endometritis	[1, 1]	Delete?
6	prob_secondary_pph_severity	[[0.33, 0.33, 0.34], [0.33, 0.33, 0.34]]
7	cfr_secondary_postpartum_haemorrhage	[0.22, 0.08]
8
9	prob_htn_resolves	[0.167, 0.167]
10	weekly_prob_gest_htn_pn	[0.0025, 0.0025]
11	rr_gest_htn_obesity	[3.31, 3.31]
12	weekly_prob_pre_eclampsia_pn	[0.0017, 0.0017]	[0.0016, 0.0016]
13	rr_pre_eclampsia_obesity	[3.2, 3.2]
14	rr_pre_eclampsia_chronic_htn	[2.26, 2.26]
15	rr_pre_eclampsia_diabetes_mellitus	[3.7, 3.7]
16	probs_for_mgh_matrix_pn	[[0.918, 0.032, 0.05, 0, 0], [0.918, 0.032, 0.05, 0, 0]]	[[0.884, 0.066, 0.05, 0, 0], [0.884, 0.066, 0.05, 0, 0]]
17	probs_for_sgh_matrix_pn	[[0, 0.92, 0, 0.08, 0], [0, 0.92, 0, 0.08, 0]]
18	probs_for_mpe_matrix_pn	[[0, 0, 0.95, 0.05, 0], [0, 0, 0.95, 0.05, 0]]	[[0, 0, 0.89, 0.11, 0], [0, 0, 0.89, 0.11, 0]]
19	probs_for_spe_matrix_pn	[[0, 0, 0, 0.95, 0.05], [0, 0, 0, 0.95, 0.05]]
20	probs_for_ec_matrix_pn	[[0, 0, 0, 0, 1], [0, 0, 0, 0, 1]]
21	cfr_eclampsia	[0.028, 0.03]
22	cfr_severe_pre_eclampsia	[0.018, 0.018]
23	weekly_prob_death_severe_gest_htn	[0.00002, 0.00002]
24
25	baseline_prob_anaemia_per_week	[0.017, 0.024]
26	rr_anaemia_maternal_malaria	[1.45, 1.45]
27	rr_anaemia_recent_haemorrhage	[1.93, 1.93]
28	rr_anaemia_hiv_no_art	[4.19, 4.19]
29	prob_type_of_anaemia_pn	[[0.52,0.475, 0.005], [0.52,0.475, 0.005]]
30
31	prob_late_sepsis_endometritis	[0.000069, 0.000062]
32	rr_sepsis_endometritis_post_cs	[12.1, 12.1]
33	prob_late_sepsis_urinary_tract	[0.000054, 0.000054]
34	prob_late_sepsis_skin_soft_tissue	[0.000039, 0.000035]
35	rr_sepsis_sst_post_cs	[3.9, 3.9]	https://bmcpregnancychildbirth.biomedcentral.com/articles/10.1186/s12884-018-1891-1
36	cfr_postpartum_sepsis	[0.75, 0.49]
37
38	prob_early_onset_neonatal_sepsis_week_1	[0.02, 0.017]
39	rr_eons_maternal_chorio	[6.6, 6.6]
40	rr_eons_maternal_prom	[4.9, 4.9]
41	rr_eons_preterm_neonate	[3.36, 3.36]
42	cfr_early_onset_neonatal_sepsis	[0.064, 0.056]
43	prob_late_onset_neonatal_sepsis	[0.0045, 0.0038]
44	cfr_late_neonatal_sepsis	[0.064, 0.056]
45	prob_sepsis_disabilities	[[0.4, 0.1, 0.3, 0.1, 0.1], [0.4, 0.1, 0.3, 0.1, 0.1]]
46
47	prob_care_seeking_postnatal_emergency	[0.782, 0.782]	Chinkhumba, J. et al. (2017) ‘Household costs and time to seek care for pregnancy related complications: The role of results-based financing’, PLOS ONE. Public Library of Science, 12(9), p. e0182326. doi: 10.1371/JOURNAL.PONE.0182326.
48	prob_care_seeking_postnatal_emergency_neonate	[0.782, 0.782]	Chinkhumba, J. et al. (2017) ‘Household costs and time to seek care for pregnancy related complications: The role of results-based financing’, PLOS ONE. Public Library of Science, 12(9), p. e0182326. doi: 10.1371/JOURNAL.PONE.0182326.
49	odds_care_seeking_fistula_repair	[1.5, 1.5]
50	aor_cs_fistula_age_15_19	[0.31, 0.31]
51	aor_cs_fistula_age_lowest_education	[0.69, 0.69]
52
53	treatment_effect_iron_folic_acid_anaemia	[0.3, 0.3]
54	treatment_effect_early_init_bf	[0.55, 0.55]
55	treatment_effect_abx_prom	[0.67, 0.67]
56	treatment_effect_cord_care	[0.77,0.77]
57	treatment_effect_clean_birth	[0.73, 0.73]
58	treatment_effect_anti_htns_progression_pn	[0.49, 0.49]

parameter_values_old

	parameter_name	value	Unnamed: 2	Source
0	prob_htn_resolves	0.8		Dummy value
1	prob_secondary_pph	0.05		Dummy value
2	cfr_secondary_pph	0.0014		Dummy value
3	cfr_postnatal_sepsis	0.0014		Dummy value
4	prob_secondary_pph_severity	[0.33, 0.33, 0.34]		Dummy value
5	prob_obstetric_fistula	0.1		Dummy value
6	prevalence_type_of_fistula	[0.5, 0.5]		Dummy value
7	prob_iron_def_per_week_pn	0.01		Dummy value
8	rr_iron_def_ifa_pn	0.43		Daily oral iron supplementation during pregnancy - https://pubmed.ncbi.nlm.nih.gov/26198451/
9	prob_folate_def_per_week_pn	0.0025		Dummy value
10	rr_folate_def_ifa_pn	0.43		Daily oral iron supplementation during pregnancy - https://pubmed.ncbi.nlm.nih.gov/26198451/
11	prob_b12_def_per_week_pn	0.0025		Dummy value
12	baseline_prob_anaemia_per_week	0.001		Dummy value
13	prob_type_of_anaemia_pn	[0.33, 0.33, 0.34]		Dummy value
14	rr_anaemia_if_iron_deficient_pn	1.5		Dummy value
15	rr_anaemia_if_folate_deficient_pn	1.25		Dummy value
16	rr_anaemia_if_b12_deficient_pn	1.25		Dummy value
17	prob_endometritis_pn	0.1		Dummy value
18	prob_urinary_tract_inf_pn	0.1		Dummy value
19	prob_skin_soft_tissue_inf_pn	0.1		Dummy value
20	prob_other_inf_pn	0.1		Dummy value
21	treatment_effect_early_init_bf	0.85		Breastfeeding effect sizes on mortality in LiST (technical note found in spectrum help section)
22	treatment_effect_abx_prom	0.61		Antibiotics for pre-term pre-labour rupture of membranes: prevention of neonatal deaths due to complications of pre-term birth and infection
23	treatment_effect_inj_abx_sep	0.35		Effect of case management on neonatal mortality due to sepsis and pneumonia (2011) https://pubmed.ncbi.nlm.nih.gov/21501430/
24	treatment_effect_supp_care_sep	0.2		Effect of case management on neonatal mortality due to sepsis and pneumonia (2011) https://pubmed.ncbi.nlm.nih.gov/21501430/
25	treatment_effect_cord_care	0.77		Clean birth and postnatal care practices to reduce neonatal deaths from sepsis and tetanus: a systematic review and Delphi estimation of mortality effect
26	treatment_effect_clean_birth	0.73		Clean birth and postnatal care practices to reduce neonatal deaths from sepsis and tetanus: a systematic review and Delphi estimation of mortality effect
27	prob_early_onset_neonatal_sepsis_week_1	0.25		Dummy value
28	cfr_early_onset_neonatal_sepsis	0.25		Dummy value
29	prob_late_sepsis_endometritis	0.1		Dummy value
30	prob_late_sepsis_urinary_tract_inf	0.1		Dummy value
31	prob_late_sepsis_skin_soft_tissue_inf	0.1		Dummy value
32	prob_late_sepsis_other_maternal_infection_pp	0.1		Dummy value
33	prob_late_onset_neonatal_sepsis	0.1		Dummy value
34	cfr_late_neonatal_sepsis	0.25		Dummy value
35	prob_sepsis_disabilities	[0.4, 0.1, 0.3, 0.1, 0.1]		Dummy value
36	prob_htn_persists	0.2		Dummy value
37	weekly_prob_gest_htn_pn	0.001		Dummy value
38	weekly_prob_pre_eclampsia_pn	0.001		Dummy value
39	probs_for_mgh_matrix_pn	[0.8, 0.1, 0.1, 0.0, 0.0]
40	probs_for_sgh_matrix_pn	[0.0, 0.8, 0.0, 0.2, 0.0]
41	probs_for_mpe_matrix_pn	[0.0, 0.0, 0.8, 0.2, 0.0]
42	probs_for_spe_matrix_pn	[0.0, 0.0, 0.0, 0.6, 0.4]
43	probs_for_ec_matrix_pn	[0.0, 0.0, 0.0, 0.0, 1]
44	cfr_eclampsia_pn	0.0014	0.15	Dummy value
45	cfr_severe_htn_pn	0.0014
46	prob_attend_pnc2	0.25		Dummy value
47	prob_attend_pnc3	0.25		Dummy value
48	treatment_effect_anti_htns_progression_pn	0.49		Antihypertensive drug therapy for mild to moderate hypertension during pregnancy - https://www.cochranelibrary.com/cdsr/doi/10.1002/14651858.CD002252.pub4/full
49	treatment_effect_parenteral_antibiotics	0.2		Estimating the impact of interventions on causespecific maternal mortality: a Delphi approach
50	treatment_effect_bemonc_care_pph	0.25		Estimating the impact of interventions on causespecific maternal mortality: a Delphi approach
51	treatment_effect_anti_htns	0.5		Estimating the impact of interventions on causespecific maternal mortality: a Delphi approach
52	treatment_effect_mag_sulph	0.4		Estimating the impact of interventions on causespecific maternal mortality: a Delphi approach
53	neonatal_sepsis_treatment_effect	0.2		Effect of case management on neonatal mortality due to sepsis and pneumonia (2011) https://pubmed.ncbi.nlm.nih.gov/21501430/
54	severity_late_infection_pn	[0.64, 0.22, 0.14]		Dummy value
55	prob_care_seeking_postnatal_emergency	0.5		Dummy value
56	prob_care_seeking_postnatal_emergency_neonate	0.5		Dummy value
57	odds_care_seeking_fistula_repair	1.5		Treatment-seeking for vaginal fistula in sub-Saharan Africa - this value is made up
58	aor_cs_fistula_age_15_19	0.31		Treatment-seeking for vaginal fistula in sub-Saharan Africa
59	aor_cs_fistula_age_lowest_education	0.69		Treatment-seeking for vaginal fistula in sub-Saharan Africa
60	prob_pnc1_at_day_7	0.4		Dummy value
61	multiplier_for_care_seeking_with_comps	2		Dummy value
62	sensitivity_bp_monitoring_pn	0.9
63	specificity_bp_monitoring_pn	0.9
64	sensitivity_urine_protein_1_plus_pn	0.9
65	specificity_urine_protein_1_plus_pn	0.9
66	sensitivity_poc_hb_test_pn	0.9
67	specificity_poc_hb_test_pn	0.9
68	sensitivity_maternal_sepsis_assessment	0.9
69	sensitivity_pph_assessment	0.9
70	sensitivity_lons_assessment	0.9
71	sensitivity_eons_assessment	0.9
72	prob_intervention_delivered_sep_assessment_pnc	0.9
73	prob_intervention_delivered_pph_assessment_pnc	0.9
74	prob_intervention_delivered_urine_ds_pnc	0.9
75	prob_intervention_delivered_bp_pnc	0.9
76	prob_intervention_delivered_hiv_test_pnc	0.9
77	prob_intervention_poct_pnc	0.9
78	prob_intervention_neonatal_sepsis_pnc	0.9
79	prob_intervention_delivered_depression_screen_pnc	0.9
80		0.9