cmd condition death (.xlsx)

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info

	ResourceFile_cmd_condition_death
0	Created by Britta Jewell on 25 March 2021
1
2	This file reads in parameters for the death rates for each condition annually in the CMD module in the TLO model. Each tab represents one condition modelled.
3	All values have been calibrated for each condition to data from Malawi.

diabetes

	parameter_name	value
0	baseline_annual_probability	0.013
1	rr_male	3.2
2	rr_0_4	0
3	rr_5_9	0
4	rr_10_14	0
5	rr_15_19	0
6	rr_20_24	0.2
7	rr_25_29	0.2
8	rr_30_34	0.25
9	rr_35_39	0.25
10	rr_40_44	0.3
11	rr_45_49	0.3
12	rr_50_54	0.33
13	rr_55_59	0.379717
14	rr_60_64	0.556092
15	rr_65_69	0.629275
16	rr_70_74	1
17	rr_75_79	1.5
18	rr_80_84	1
19	rr_85_89	4
20	rr_90_94	7
21	rr_95_99	7
22	rr_100	7
23	rr_urban	1
24	rr_wealth_1	1
25	rr_wealth_2	1
26	rr_wealth_3	1
27	rr_wealth_4	1
28	rr_wealth_5	1
29	rr_bmi_1	1
30	rr_bmi_2	1
31	rr_bmi_3	1
32	rr_bmi_4	1
33	rr_bmi_5	1
34	rr_low_exercise	1
35	rr_high_salt	1
36	rr_high_sugar	1
37	rr_tobacco	1
38	rr_alcohol	1
39	rr_marital_status_1	1
40	rr_marital_status_2	1
41	rr_marital_status_3	1
42	rr_in_education	1
43	rr_current_education_level_1	1
44	rr_current_education_level_2	1
45	rr_current_education_level_3	1
46	rr_unimproved_sanitation	1
47	rr_no_access_handwashing	1
48	rr_no_clean_drinking_water	1
49	rr_wood_burning_stove	1
50	rr_diabetes	1
51	rr_hypertension	1
52	rr_depression	1
53	rr_chronic_kidney_disease	1
54	rr_chronic_lower_back_pain	1
55	rr_chronic_ischemic_heart_disease	1
56	rr_cancers	1
57	rr_hiv	1
58	rr_ever_stroke	1
59	rr_ever_heart_attack	1
60	rr_diabetes_on_medication	1
61	rr_hypertension_on_medication	1
62	rr_chronic_kidney_disease_on_medication	1
63	rr_chronic_lower_back_pain_on_medication	1
64	rr_chronic_ischemic_heart_disease_on_medication	1
65	rr_stroke_on_medication	1
66	rr_heart_attack_on_medication	1

hypertension

	parameter_name	value
0	baseline_annual_probability	0
1	rr_male	0
2	rr_0_4	0
3	rr_5_9	0
4	rr_10_14	0
5	rr_15_19	0
6	rr_20_24	0
7	rr_25_29	0
8	rr_30_34	0
9	rr_35_39	0
10	rr_40_44	0
11	rr_45_49	0
12	rr_50_54	0
13	rr_55_59	0
14	rr_60_64	0
15	rr_65_69	0
16	rr_70_74	0
17	rr_75_79	0
18	rr_80_84	0
19	rr_85_89	0
20	rr_90_94	0
21	rr_95_99	0
22	rr_100	0
23	rr_urban	0
24	rr_wealth_1	0
25	rr_wealth_2	0
26	rr_wealth_3	0
27	rr_wealth_4	0
28	rr_wealth_5	0
29	rr_bmi_1	0
30	rr_bmi_2	0
31	rr_bmi_3	0
32	rr_bmi_4	0
33	rr_bmi_5	0
34	rr_low_exercise	0
35	rr_high_salt	0
36	rr_high_sugar	0
37	rr_tobacco	0
38	rr_alcohol	0
39	rr_marital_status_1	0
40	rr_marital_status_2	0
41	rr_marital_status_3	0
42	rr_in_education	0
43	rr_current_education_level_1	0
44	rr_current_education_level_2	0
45	rr_current_education_level_3	0
46	rr_unimproved_sanitation	0
47	rr_no_access_handwashing	0
48	rr_no_clean_drinking_water	0
49	rr_wood_burning_stove	0
50	rr_diabetes	0
51	rr_hypertension	0
52	rr_depression	0
53	rr_chronic_kidney_disease	0
54	rr_chronic_lower_back_pain	0
55	rr_chronic_ischemic_heart_disease	0
56	rr_cancers	0
57	rr_hiv	0
58	rr_ever_stroke	0
59	rr_ever_heart_attack	0
60	rr_diabetes_on_medication	1
61	rr_hypertension_on_medication	1
62	rr_chronic_kidney_disease_on_medication	1
63	rr_chronic_lower_back_pain_on_medication	1
64	rr_chronic_ischemic_heart_disease_on_medication	1
65	rr_stroke_on_medication	1
66	rr_heart_attack_on_medication	1

chronic_lower_back_pain

	parameter_name	value
0	baseline_annual_probability	0
1	rr_male	0
2	rr_0_4	0
3	rr_5_9	0
4	rr_10_14	0
5	rr_15_19	0
6	rr_20_24	0
7	rr_25_29	0
8	rr_30_34	0
9	rr_35_39	0
10	rr_40_44	0
11	rr_45_49	0
12	rr_50_54	0
13	rr_55_59	0
14	rr_60_64	0
15	rr_65_69	0
16	rr_70_74	0
17	rr_75_79	0
18	rr_80_84	0
19	rr_85_89	0
20	rr_90_94	0
21	rr_95_99	0
22	rr_100	0
23	rr_urban	0
24	rr_wealth_1	0
25	rr_wealth_2	0
26	rr_wealth_3	0
27	rr_wealth_4	0
28	rr_wealth_5	0
29	rr_bmi_1	0
30	rr_bmi_2	0
31	rr_bmi_3	0
32	rr_bmi_4	0
33	rr_bmi_5	0
34	rr_low_exercise	0
35	rr_high_salt	0
36	rr_high_sugar	0
37	rr_tobacco	0
38	rr_alcohol	0
39	rr_marital_status_1	0
40	rr_marital_status_2	0
41	rr_marital_status_3	0
42	rr_in_education	0
43	rr_current_education_level_1	0
44	rr_current_education_level_2	0
45	rr_current_education_level_3	0
46	rr_unimproved_sanitation	0
47	rr_no_access_handwashing	0
48	rr_no_clean_drinking_water	0
49	rr_wood_burning_stove	0
50	rr_diabetes	0
51	rr_hypertension	0
52	rr_depression	0
53	rr_chronic_kidney_disease	0
54	rr_chronic_lower_back_pain	0
55	rr_chronic_ischemic_heart_disease	0
56	rr_cancers	0
57	rr_hiv	0
58	rr_ever_stroke	0
59	rr_ever_heart_attack	0
60	rr_diabetes_on_medication	0
61	rr_hypertension_on_medication	0
62	rr_chronic_kidney_disease_on_medication	0
63	rr_chronic_lower_back_pain_on_medication	0
64	rr_chronic_ischemic_heart_disease_on_medication	0
65	rr_stroke_on_medication	0
66	rr_heart_attack_on_medication	0

chronic_kidney_disease

	parameter_name	value
0	baseline_annual_probability	0.009
1	rr_male	2.2
2	rr_0_4	0
3	rr_5_9	0
4	rr_10_14	0
5	rr_15_19	0
6	rr_20_24	0.25
7	rr_25_29	0.2
8	rr_30_34	0.2
9	rr_35_39	0.3
10	rr_40_44	0.35
11	rr_45_49	0.35
12	rr_50_54	0.35
13	rr_55_59	0.4
14	rr_60_64	0.7
15	rr_65_69	0.7
16	rr_70_74	0.8
17	rr_75_79	1
18	rr_80_84	1.57274
19	rr_85_89	2.89137
20	rr_90_94	2.84713
21	rr_95_99	4.4324
22	rr_100	4.4324
23	rr_urban	1
24	rr_wealth_1	1
25	rr_wealth_2	1
26	rr_wealth_3	1
27	rr_wealth_4	1
28	rr_wealth_5	1
29	rr_bmi_1	1
30	rr_bmi_2	1
31	rr_bmi_3	1
32	rr_bmi_4	1
33	rr_bmi_5	1
34	rr_low_exercise	1
35	rr_high_salt	1
36	rr_high_sugar	1
37	rr_tobacco	1
38	rr_alcohol	1
39	rr_marital_status_1	1
40	rr_marital_status_2	1
41	rr_marital_status_3	1
42	rr_in_education	1
43	rr_current_education_level_1	1
44	rr_current_education_level_2	1
45	rr_current_education_level_3	1
46	rr_unimproved_sanitation	1
47	rr_no_access_handwashing	1
48	rr_no_clean_drinking_water	1
49	rr_wood_burning_stove	1
50	rr_diabetes	1
51	rr_hypertension	1
52	rr_depression	1
53	rr_chronic_kidney_disease	1
54	rr_chronic_lower_back_pain	1
55	rr_chronic_ischemic_heart_disease	1
56	rr_cancers	1
57	rr_hiv	1
58	rr_ever_stroke	1
59	rr_ever_heart_attack	1
60	rr_diabetes_on_medication	1
61	rr_hypertension_on_medication	1
62	rr_chronic_kidney_disease_on_medication	1
63	rr_chronic_lower_back_pain_on_medication	1
64	rr_chronic_ischemic_heart_disease_on_medication	1
65	rr_stroke_on_medication	1
66	rr_heart_attack_on_medication	1

chronic_ischemic_hd

	parameter_name	value
0	baseline_annual_probability	0.013
1	rr_male	1.4
2	rr_0_4	0
3	rr_5_9	0
4	rr_10_14	0
5	rr_15_19	0
6	rr_20_24	0.673277
7	rr_25_29	0.673277
8	rr_30_34	0.615122
9	rr_35_39	0.641215
10	rr_40_44	0.8
11	rr_45_49	0.8
12	rr_50_54	0.92
13	rr_55_59	1
14	rr_60_64	1.2
15	rr_65_69	1.4
16	rr_70_74	1.6
17	rr_75_79	2.17427
18	rr_80_84	3.12293
19	rr_85_89	4.90677
20	rr_90_94	6.3674
21	rr_95_99	10.1752
22	rr_100	10.1752
23	rr_urban	1
24	rr_wealth_1	1
25	rr_wealth_2	1
26	rr_wealth_3	1
27	rr_wealth_4	1
28	rr_wealth_5	1
29	rr_bmi_1	1
30	rr_bmi_2	1
31	rr_bmi_3	1
32	rr_bmi_4	1
33	rr_bmi_5	1
34	rr_low_exercise	1
35	rr_high_salt	1
36	rr_high_sugar	1
37	rr_tobacco	1
38	rr_alcohol	1
39	rr_marital_status_1	1
40	rr_marital_status_2	1
41	rr_marital_status_3	1
42	rr_in_education	1
43	rr_current_education_level_1	1
44	rr_current_education_level_2	1
45	rr_current_education_level_3	1
46	rr_unimproved_sanitation	1
47	rr_no_access_handwashing	1
48	rr_no_clean_drinking_water	1
49	rr_wood_burning_stove	1
50	rr_diabetes	1
51	rr_hypertension	1
52	rr_depression	1
53	rr_chronic_kidney_disease	1
54	rr_chronic_lower_back_pain	1
55	rr_chronic_ischemic_heart_disease	1
56	rr_cancers	1
57	rr_hiv	1
58	rr_ever_stroke	1
59	rr_ever_heart_attack	1
60	rr_diabetes_on_medication	1
61	rr_hypertension_on_medication	1
62	rr_chronic_kidney_disease_on_medication	1
63	rr_chronic_lower_back_pain_on_medication	1
64	rr_chronic_ischemic_heart_disease_on_medication	1
65	rr_stroke_on_medication	1
66	rr_heart_attack_on_medication	1